RCOR1 transcriptional regulatory sub-network

The possible genes regulated by the transcription factor were obtained by calculation, and the results were displayed in the form of network

NETWORK ID: CN1318

In order to ensure the specificity of data, an ID index is built by the database itself, and each result corresponds to an ID.

CONDITION: nelfinavir

IDBRD-K74117820
namenelfinavir
typeSmall molecule
molecular formulaC32H45N3O4S
molecular weight567.8
condition dose10 uM
condition time24 h
smilesCc1c(O)cccc1C(=O)N[C@@H](CSc1ccccc1)[C@H](O)CN1C[C@H]2CCCC[C@H]2C[C@H]1C(=O)NC(C)(C)C

CONDITION TYPE: trt_cp

Compound

CELL LINE: MCF7

Cell lines used for experiments

TRANSCRIPTION FACTOR: RCOR1

Transcription regulatory factors corresponding to this network

ARTICLE: nelfinavir

[1] HIV protease inhibitor nelfinavir inhibits replication of SARS-associated coronavirus.

[2] Nelfinavir mesylate.

[3] Effects of repurposed drug candidates nitroxoline and nelfinavir as single agents or in combination with erlotinib in pancreatic cancer cells.

[4] Potentiation of the leishmanicidal activity of nelfinavir in combination with miltefosine or amphotericin B.

[5] Differences in rates of diarrhea in patients with human immunodeficiency virus receiving lopinavir-ritonavir or nelfinavir.

[6] Nelfinavir with concurrent chemoradiotherapy in NSCLC.

[7] New prospects for nelfinavir in non-HIV-related diseases.

[8] Complex drug interactions of the HIV protease inhibitors 3: effect of simultaneous or staggered dosing of digoxin and ritonavir, nelfinavir, rifampin, or bupropion.

[9] HIV protease inhibitors, indinavir or nelfinavir, augment antimalarial action of artemisinin in vitro.

[10] Nelfinavir and lenalidomide/dexamethasone in patients with lenalidomide-refractory multiple myeloma. A phase I/II Trial (SAKK 39/10).

Curated target protein/gene of this condition/drug

Protein target or gene target of this condition curated by previous studies and their associated KEGG pathways are shown below

Target Gene KEGG pathway

CYP1A2

hsa05204

CYP2B6

hsa00982

CYP2C19

hsa00591

CYP2C9

hsa00830

CYP2D6

CYP3A4

hsa00830

CYP3A7

hsa00140

Differential expressed genes in this transcriptional regulatory sub-network

| logfc | > 0.45 and P < = 1e-5. If you want to view or download the data, you can click [expand]

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Symbolcontrolcontrolcontrolcondition
PTPRU8.50168.53158.35326.004
CDK411.66311.119911.64328.0536
DAG15.93165.67085.783.1166
FGFR46.2396.01765.88263.351
AKT111.842211.430311.5038.7814
MRPL1213.375813.412313.331111.3216
RPA110.384110.34419.98797.227
KIF2C7.96897.87718.0085.6951
RAD9A7.25727.22237.23615.0589
SMC49.28088.75019.13086.4134
LRPAP19.08148.6929.27986.1381
NIPSNAP19.55079.34089.69477.1515
FHL210.997710.50210.88978.1088
PPIE10.72310.74210.39777.8182
TCFL56.28955.96785.90842.2232
YME1L18.82068.61938.54775.9762
G3BP18.71888.78628.48846.3165
USP77.15917.2287.37024.1981
DLD12.705112.801912.7595.5491
WDTC18.04167.68548.07595.3227
CSRP113.295713.167213.2696.9373
ACD10.155210.435910.92454.943
GOLT1B10.528510.749310.74933.8013
HOMER28.26548.01357.864.9694
AMDHD29.0098.92879.08336.2656
RPS6KA19.58089.60169.78536.8562
CHMP4A10.06569.92410.13984.3763
GATA310.396410.19510.79676.8682
TES11.138812.451311.53673.351
PARP29.40178.93348.86486.0479
FASTKD57.68587.75057.42565.0167
ADI19.01668.61148.63145.6451
TARBP18.2047.86567.68414.2841
GNA117.23997.46827.54414.6013
KIF20A9.18028.86748.65415.5491
RFX57.94597.30176.93282.7908
RAB1B9.58299.498610.00296.3493
F1210.275210.645610.29656.2553
DLGAP59.55399.83599.56666.6447
UBE4A8.25477.9727.79485.1049
MGST27.62967.40397.53124.4917
NUMA17.95448.25418.32894.8639
PPP1CA10.87910.639411.19897.0924
S100A1011.930412.030111.91659.5747
DCTN29.29199.14399.59016.1595
CDH111.175110.406610.77566.8065
HNRNPAB13.617713.432913.351510.8557
PLEKHB28.40568.25637.97895.765
IFI307.7787.9068.28615.2856
CLDN47.35376.75676.65873.5012
RUVBL210.95910.719311.05557.8171
LAMB17.56197.61677.82875.0661
ZNHIT110.395210.995211.03087.7857
KRT1811.291111.945912.3846.5187
MRPL499.27818.91188.93416.4094
DHCR79.09449.20319.62645.7479
LRRFIP18.58988.95388.425.1426
CKS1B13.338413.555513.463911.1925
PLK210.45849.999510.33727.3739
CIB19.84549.19889.58865.8053
ARPC1B10.283810.625311.12217.3399
FIBP9.60719.39719.62226.2331
IDH3A9.44629.38819.3737.0746
WWTR19.42968.65669.15615.9361
POLR2G11.50811.353711.62087.1082
NUTF211.166211.166211.54397.2884
CYP1B110.2549.80149.51452.5427
VAMP810.43810.049310.19447.8676
TOB110.25710.6110.17487.447
LSM411.102410.500511.16187.4251
PIEZO110.536610.95211.11395.7014
TXNL4A10.491110.394610.60277.5649
ZMPSTE2411.093611.173211.36178.8148
SLPI4.98795.14464.97610.7456
CHST158.47897.53237.6073.0183
NDUFS811.70312.145212.31168.7757
MYO610.66749.73099.53315.6256
CCS8.05997.83948.18435.2998
ALG88.01588.34358.27195.6148
TAF68.85938.50428.76646.3324
TRIP1312.11411.869611.59179.2283
TBC1D86.60986.63656.9923.7849
KIF238.91069.04089.01955.3491
MLF17.10867.29257.06494.0403
TTK8.74179.07148.72776.3603
PFN212.147512.172111.88319.4342
TFF112.336812.800612.99439.6915
BCAP298.10918.44478.38235.8681
HSPA4L7.74147.50157.09774.1809
FXYD27.61757.49437.74564.5554
HMMR11.077511.418210.86798.0283
SMTN8.48529.12918.95984.1472
TECR10.32410.904710.94246.7951
NDUFV111.213611.20112.02036.9221
PLXNB211.293611.407511.21369.0914
NEU17.75558.12667.86715.29
CRIP28.21118.71148.40775.351
GABARAPL29.912510.05479.90317.122
NHP214.900414.608814.433811.478
MSMO111.657212.130111.41588.6762
HARS28.87518.7569.04956.0727
ANXA38.17417.67317.38513.7058
CDKN310.752210.449110.21277.7414
RHOD9.56699.70379.73097.2197
TM7SF27.45117.27657.24164.8671
LAMA58.0138.41248.28615.2209
POMZP37.49428.16257.99344.8332
ARFGAP29.0719.12588.90376.8507
SMARCE110.15210.005610.01067.358
IFITM311.493911.48311.76578.8668
SGPL110.039810.495710.00457.5153
ZC3H137.7357.87168.19875.4256
SYNM12.754311.995911.87477.2817
NME49.86629.976610.48056.1017
TSPYL46.77426.76556.73354.1696
FANCI9.83199.733610.00317.5353
ERI28.48278.37068.58116.2311
COQ27.9767.82597.6135.0753
EIF4E211.905111.741611.56569.4488
CA1210.02310.510710.35166.9366
TIMM17A11.780511.637411.61258.7277
BRMS19.08439.26289.2426.4812
TRIOBP8.51268.16018.28285.4024
YTHDF28.2097.99448.31675.8623
ARPC411.312710.964411.19128.3188
WBP1110.444710.525610.24038.016
CFAP209.24948.84948.55785.6804
VPS519.51479.35159.76217.1385
PRC19.84279.81049.37975.3086
SLC12A79.05928.64068.90396.1691
MLPH12.150911.99911.92569.6408
METTL1712.309212.020312.12059.8881
MRPS309.19488.30299.13644.9637
SNX108.24097.70698.60974.5577
KANK26.36195.90846.30253.5542
CMC211.591711.202411.15377.8741
TMEM14A10.03159.65879.70147.2747
WDR5910.135910.128710.12757.7923
PNPO9.86549.81989.61456.3085
RPL26L110.301810.474610.54677.874
PAAF17.29717.31777.28495.2221
LTBP36.23925.61436.96031.4192
PRPF397.24067.00496.80184.4273
GDF1513.808714.343713.80879.8824
TMEM20810.14210.14799.96257.0221
EHBP1L17.21426.80936.68214.0911
TBC1D167.51847.65967.7285.2781
LRRC599.69449.878810.04357.4783
SH3BP47.31727.13136.97054.6283
TEAD48.59148.82878.51096.3411
CORO1B11.472111.595211.63969.2076
RABEP29.908210.221810.04877.3004
TLE27.84667.73087.7645.529
C11orf808.52598.5518.60096.3861

RCOR1 transcriptional regulatory sub-network

The possible genes regulated by the transcription factor were obtained by calculation, and the results were displayed in the form of network

ARTICLE: RCOR1

[1] ZNF750 interacts with KLF4 and RCOR1, KDM1A, and CTBP1/2 chromatin regulators to repress epidermal progenitor genes and induce differentiation genes.

[2] REST corepressors RCOR1 and RCOR2 and the repressor INSM1 regulate the proliferation-differentiation balance in the developing brain.

[3] Corepressor Rcor1 is essential for murine erythropoiesis.

[4] RCOR1 directly binds to MED28 and weakens its inducing effect on cancer stem cell-like activity of oral cavity squamous cell carcinoma cells.

[5] The Corepressor Rcor1 Is Essential for Normal Myeloerythroid Lineage Differentiation.

[6] An RCOR1 loss-associated gene expression signature identifies a prognostically significant DLBCL subgroup.

[7] CoRest1 regulates neurogenesis in a stage-dependent manner.

[8] MicroRNAs as Diagnostic and Prognostic Biomarkers in Ischemic Stroke-A Comprehensive Review and Bioinformatic Analysis.

Transcription factor KEGG

The KEGG pathway of the TF in this TRN is shown below

hsa05016