PAF1 transcriptional regulatory sub-network

The possible genes regulated by the transcription factor were obtained by calculation, and the results were displayed in the form of network

NETWORK ID: CN424

In order to ensure the specificity of data, an ID index is built by the database itself, and each result corresponds to an ID.

CONDITION: dorsomorphin

IDBRD-K54233340
namedorsomorphin
typeSmall molecule
molecular formulaC24H25N5O
molecular weight399.5
condition dose10 uM
condition time24 h
smilesC(CN1CCCCC1)Oc1ccc(cc1)-c1cnc2c(cnn2c1)-c1ccncc1

CONDITION TYPE: trt_cp

Compound

CELL LINE: MCF7

Cell lines used for experiments

TRANSCRIPTION FACTOR: PAF1

Transcription regulatory factors corresponding to this network

ARTICLE: dorsomorphin

[1] Zebrafish as tools for drug discovery.

[2] Compound C/Dorsomorphin: Its Use and Misuse as an AMPK Inhibitor.

[3] Dorsomorphin inhibits BMP signals required for embryogenesis and iron metabolism.

[4] Role of AMP-activated protein kinase in mechanism of metformin action.

[5] Ezetimibe Attenuates Oxidative Stress and Neuroinflammation via the AMPK/Nrf2/TXNIP Pathway after MCAO in Rats.

[6] Apelin-13/APJ system attenuates early brain injury via suppression of endoplasmic reticulum stress-associated TXNIP/NLRP3 inflammasome activation and oxidative stress in a AMPK-dependent manner after subarachnoid hemorrhage in rats.

[7] Application of a Dynamic Map for Learning, Communicating, Navigating, and Improving Therapeutic Development.

[8] Bilobalide Suppresses Adipogenesis in 3T3-L1 Adipocytes via the AMPK Signaling Pathway.

[9] Bone morphogenetic protein receptors and signal transduction.

Curated target protein/gene of this condition/drug

Protein target or gene target of this condition curated by previous studies and their associated KEGG pathways are shown below

Target Gene KEGG pathway

ACVR1

hsa04350

BMPR1A

hsa04390

BMPR1B

hsa04390

EPHA2

hsa04360

FKBP1A

FLT1

hsa04010

FLT3

hsa04010

KDR

hsa04510

LCK

hsa05166

MKNK1

hsa04910

PRKAA1

hsa04932

RPS6KA1

hsa05207

SRC

hsa04919

Differential expressed genes in this transcriptional regulatory sub-network

| logfc | > 0.45 and P < = 1e-5. If you want to view or download the data, you can click [expand]

you can download all data

Symbolcontrolcontrolcontrolconditionconditionconditionconditionconditioncondition
CNPY46.6376.76766.49565.56445.51225.43055.69895.72475.6121
PTCD24.74144.94185.06693.81233.34173.49223.67413.48823.4684
PSMD412.265112.294112.086110.674411.052410.985411.249811.040410.957
CEBPA6.33816.41416.0833.4194.48024.04124.33023.90163.7224
CDK411.746512.028111.85758.44939.62949.46218.36439.39449.499
TP5310.905510.76210.52797.63367.41557.29517.43927.19257.9771
MUC17.64676.89817.02644.24034.064.48974.27134.344.3993
AURKB10.03249.7929.9036.4396.9966.28446.84577.92537.4147
CDC25B12.076511.760412.05779.22449.81779.50079.97959.60969.7486
ICAM38.2258.81028.24466.60386.09136.31986.0825.88086.1239
BDH19.28139.389.40945.58555.95756.35976.89075.99786.1327
EML38.9888.67689.00287.29037.21637.6827.49177.50857.4518
ARFIP29.47459.42410.35617.12986.656.81197.99266.92956.8266
CDK29.75949.7879.80978.54718.19037.91498.01628.10828.1581
SPAG79.87229.882810.33117.68447.71198.06818.39888.37977.7417
MRPL1212.817912.680112.96429.41539.51869.25410.39339.353510.1674
CBR18.71598.98778.97947.5497.28127.557.56947.18737.2396
POP410.506710.280710.45857.2745.98917.16697.76747.07917.5849
PSMG111.153511.227111.35668.69078.50339.02599.23398.85769.1637
MYC10.083110.11410.05418.61289.11179.0119.05358.67358.8573
CIRBP9.26299.17518.78537.07967.43867.497.02067.42757.6626
SKIV2L8.47168.36298.73675.81656.11436.0776.62376.44246.4028
STX49.43988.96129.37697.84037.40237.3387.87957.69567.772
HADH10.237610.23910.17448.87998.71828.4957.8248.63718.6102
GALE10.118510.01739.90164.85766.41435.59546.40496.21815.7831
LOXL17.89827.33897.74435.69485.60715.41986.11555.74026.4028
PAFAH1B311.041710.963111.15357.86468.96458.73799.11058.5148.7698
POLD48.89098.95618.80556.06186.41436.70956.46246.50376.8678
TSEN28.66238.71998.5147.02946.9246.76626.2956.57856.3379
FPGS8.61848.47198.5626.63576.036.03495.9366.2346.6251
PLSCR38.01198.17148.6785.23946.26625.82116.00945.86335.7919
COPS7A10.191310.195110.31568.36688.69738.8648.74488.5748.7126
CHMP65.55665.94066.1053.80323.98513.92754.08164.13583.9002
ST6GALNAC27.59218.01148.72554.55045.53554.8945.43055.65025.3053
AMDHD29.66219.72210.67445.97275.9285.86896.09656.14396.2355
C2CD510.414410.257110.8828.177.95068.28278.78567.99467.867
MRPS1611.783812.046511.961110.31710.063310.385510.22939.453810.213
NOL39.81449.835510.18838.04837.89967.77978.10178.30278.1234
INTS38.45218.38238.70486.74816.75696.91467.3016.95736.9586
POLE28.64479.51149.84936.49975.5195.77855.98495.87456.4457
CDC459.42529.70989.42527.2177.07916.94256.58557.2527.458
ECHDC17.56947.4187.67475.9146.10586.22766.50596.03256.1141
KDELR36.11265.75236.26983.53233.58313.53034.36693.52443.7048
CCT712.107711.530411.789210.441410.363610.162510.60110.475710.2495
HAX110.864310.392310.6019.08999.38958.99539.05958.78649.181
HNRNPAB13.15413.368213.324411.182511.574211.25811.617711.262611.6284
EIF4A39.54139.60969.63756.84847.28677.7917.28187.4117.3399
RUVBL211.323711.821112.3539.801510.12979.77639.955910.14769.9056
SRM11.669511.536611.33539.681510.047210.018510.47159.885710.1756
PHB212.589612.524212.500110.865611.104910.78111.045311.053811.2005
SRSF18.49818.19797.89296.72746.36776.6966.85026.88766.8879
PRKAG18.44068.5748.45256.32077.20387.00416.94116.93256.6024
IMPDH29.50669.2439.67177.15997.94087.45377.60457.20457.5664
FIBP10.304310.414410.18788.55158.94088.83749.12068.73558.6285
MTHFD111.615911.410112.17339.668610.41569.704610.14139.93879.676
DHFR10.552610.823910.07178.90628.61548.31518.03948.65638.3364
GDE18.47348.56458.5586.91197.06667.08827.23327.18667.5632
CAD9.10199.18089.07456.74637.16677.51417.87167.37547.4712
RNASEH2A11.570611.588311.37517.84358.18638.44687.77448.40538.3925
MRPL409.23219.10659.6537.70727.80597.06647.07176.77756.8391
TPBG11.35911.168911.82919.10479.13098.47069.22969.31468.5828
PCYOX17.3337.21966.87915.37055.25015.87635.34635.63445.4216
NQO29.34189.74979.3346.57397.94527.14527.31317.08866.4777
NMI6.57296.16316.53583.88034.56013.95083.8984.54924.4215
GADD45G6.36586.25795.48223.93744.11174.40574.12114.33214.2243
MRPL5713.223412.806713.258611.150911.31910.749910.638111.057410.9174
FAM216A9.31558.77718.69325.99715.95786.29725.97075.73986.1452
NUDT17.69297.91077.91746.62226.55886.47466.69446.58726.4117
POP512.257712.900712.1689.642810.059410.2779.93499.73429.826
OCEL17.47697.43557.62396.23756.58096.52666.51016.47036.3548
ZDHHC249.64559.36239.48487.69297.91187.64798.1598.02618.2004
CCDC228.87538.90278.8416.93367.49487.1557.26357.60767.5963
GCDH8.54158.13648.49116.17236.29455.46116.0586.07016.2271
UCP210.795511.343811.53668.58958.81238.93768.8129.35658.9083
NHP21514.295814.897712.00912.522512.051312.532812.042512.5001
COMMD410.094110.110110.57258.04138.38418.09668.30787.48978.0623
NDUFAF38.86939.70189.16617.46936.8936.97587.646.86256.4984
MPDU110.42079.78899.85518.33958.53567.96658.05458.65258.4739
WDR189.27419.45519.20957.7667.98527.33868.02337.86187.6832
PCYT28.98938.4898.72987.13337.23636.63687.34817.33097.1747
BUB19.28389.08859.53367.48617.89167.6597.51888.12747.9373
CDKN311.577611.887411.271710.06539.70989.92359.86649.6379.8385
APEX114.083513.227113.495311.11711.544111.026810.834311.131311.7429
SSNA19.71269.58029.65028.64068.41548.38598.68378.37118.2382
GBAP110.504410.317610.38767.6238.73148.09457.78478.31937.9837
DOK16.38716.35066.48444.79134.90165.29025.35664.7645.0419
GYG111.511911.506611.03159.52129.94349.73119.44699.4099.5763
MRPS279.95859.86829.77968.23118.70578.22978.80968.37648.6504
MTG19.08429.33769.43547.55617.5547.59477.21967.43667.5029
GADD45GIP110.697510.650810.87198.94038.6258.789.11178.59958.7392
PFAS9.60819.51439.48726.9587.86577.7747.54157.65767.7506
HSD17B87.11047.18097.08274.76264.83824.4665.38894.29484.1311
BMPR1A8.50338.33538.70546.25776.78077.07726.00856.30536.6292
TUBB4B12.199612.366912.778210.059410.239410.676510.030810.25969.7022
RBMX10.403710.014110.03598.53018.78258.00918.64968.60428.7871
SRSF711.607211.993611.3389.4729.239210.00519.01159.49959.5719
FARSA9.32829.4259.42867.14027.8787.13347.60177.39727.9215
MTCH211.535411.499911.540310.03489.45349.09999.60688.88419.1213
GPS110.919811.036411.2969.51899.39069.21349.49189.44849.984
MAPKAP17.73437.63817.55945.53395.72556.27856.37275.79515.72
MRPS712.624712.434912.57611.41911.304811.165211.175811.083311.4439
COA311.861111.619311.93579.618510.01329.60299.828910.010310.1625
COMMD39.12419.33589.59846.66057.38367.58837.56446.747.0906
MRPS3410.96710.865610.97079.65219.90269.57710.00879.78729.5749
ASF1B10.920810.913210.61228.65868.4318.40218.81768.69269.059
C12orf1010.244110.299210.28149.17439.22819.15439.10449.2439.1272
RMND5B9.51389.3969.7477.75647.75297.28468.058.13447.8436
TACC39.77779.43789.3656.77246.87697.09017.28657.74457.2646
ZWILCH8.74589.35629.35817.24337.00936.8477.40536.97996.5775
HAUS49.77039.30639.71466.72197.29247.82167.56897.51097.8051
GPN39.29089.43739.57398.14367.9837.58997.74417.517.8199
THAP78.13417.94138.27826.89317.0526.75616.99296.6226.8024
SNRNP2511.921511.764912.57919.788610.37199.872410.252910.186910.4321
TMEM1349.1838.94138.69137.12577.0596.79196.83116.23266.8175
ORMDL211.075811.328910.96319.00359.50869.35428.59669.04878.5828
TTC318.1218.07048.37766.4376.56236.60616.77686.29666.4956
ASPSCR19.20918.93999.02637.21227.70767.18137.4127.50437.4136
PBK9.570110.21519.91417.78857.35317.0127.82926.84067.5786
ELP511.003710.845910.86179.64098.80859.04879.15888.90138.927
ATRAID10.874310.995510.82219.489.87699.85889.53999.34349.4394
ALG68.65168.92458.61026.02036.92756.59256.50126.37836.7864
SH3D215.92736.01575.81724.37664.53324.78034.55024.68214.4285
MANSC110.524110.270810.87298.55047.70567.90948.39628.53058.1004
PUS7L6.60116.47466.46665.20945.42595.12135.41085.19754.9375
TMCO67.36817.13086.93394.17955.19274.65435.09654.69224.2457
INO80B8.20347.9357.8856.94216.88546.44696.68376.81486.5319
CDCA310.599410.314910.06448.54248.85688.30628.53428.66498.7906
CDCA810.507510.53510.69579.74089.30639.11389.33589.21559.3172
GINS210.090211.054511.15937.45858.36298.02568.1258.08547.7636
PIGP9.0079.96929.7166.54547.78526.84166.63146.68946.8856
MCM410.687210.807210.99959.3379.43119.25199.25028.97999.5504
FAHD2A9.52849.15359.30127.92047.54857.88117.68937.71917.6825

PAF1 transcriptional regulatory sub-network

The possible genes regulated by the transcription factor were obtained by calculation, and the results were displayed in the form of network

ARTICLE: PAF1

[1] PD2/PAF1 at the Crossroads of the Cancer Network.

[2] PAF1 regulation of promoter-proximal pause release via enhancer activation.

[3] Emerging Insights into the Roles of the Paf1 Complex in Gene Regulation.

[4] RNA Polymerase II-Associated Factor 1 Regulates Stem Cell Features of Pancreatic Cancer Cells, Independently of the PAF1 Complex, via Interactions With PHF5A and DDX3.

[5] Cigarette Smoke Induces Stem Cell Features of Pancreatic Cancer Cells via PAF1.

[6] The Paf1 complex transcriptionally regulates the mitochondrial-anchored protein Atg32 leading to activation of mitophagy.

[7] PAF1, a Molecular Regulator of Promoter-Proximal Pausing by RNA Polymerase II.

[8] Toxic expanded GGGGCC repeat transcription is mediated by the PAF1 complex in C9orf72-associated FTD.

[9] Competition between PAF1 and MLL1/COMPASS confers the opposing function of LEDGF/p75 in HIV latency and proviral reactivation.

[10] The Paf1 Complex Broadly Impacts the Transcriptome of Saccharomyces cerevisiae.

Transcription factor KEGG

The KEGG pathway of the TF in this TRN is shown below