KLF10 transcriptional regulatory sub-network

The possible genes regulated by the transcription factor were obtained by calculation, and the results were displayed in the form of network

NETWORK ID: CN6735

In order to ensure the specificity of data, an ID index is built by the database itself, and each result corresponds to an ID.

CONDITION: palbociclib

IDBRD-K51313569
namepalbociclib
typeSmall molecule
molecular formulaC24H29N7O2
molecular weight447.5
condition dose3.33 um
condition time24 h
smilesCC(=O)c1c(C)c2cnc(Nc3ccc(cn3)N3CCNCC3)nc2n(C2CCCC2)c1=O

CONDITION TYPE: trt_cp

Compound

CELL LINE: MCF7

Cell lines used for experiments

TRANSCRIPTION FACTOR: KLF10

Transcription regulatory factors corresponding to this network

ARTICLE: palbociclib

[1] Palbociclib plus letrozole as first-line therapy in estrogen receptor-positive/human epidermal growth factor receptor 2-negative advanced breast cancer with extended follow-up.

[2] Fulvestrant plus palbociclib versus fulvestrant plus placebo for treatment of hormone-receptor-positive, HER2-negative metastatic breast cancer that progressed on previous endocrine therapy (PALOMA-3): final analysis of the multicentre, double-blind, phase 3 randomised controlled trial.

[3] Concurrent radiotherapy with palbociclib or ribociclib for metastatic breast cancer patients: Preliminary assessment of toxicity.

[4] NeoPalAna: Neoadjuvant Palbociclib, a Cyclin-Dependent Kinase 4/6 Inhibitor, and Anastrozole for Clinical Stage 2 or 3 Estrogen Receptor-Positive Breast Cancer.

[5] Treating cancer with selective CDK4/6 inhibitors.

[6] Treatment patterns and clinical outcomes among patients receiving palbociclib in combination with an aromatase inhibitor or fulvestrant for HR+/HER2-negative advanced/metastatic breast cancer in real-world settings in the US: Results from the IRIS study.

[7] Targeting CDK4/6 in patients with cancer.

Curated target protein/gene of this condition/drug

Protein target or gene target of this condition curated by previous studies and their associated KEGG pathways are shown below

Target Gene KEGG pathway

CDK4

hsa04934

CDK6

hsa05206

Differential expressed genes in this transcriptional regulatory sub-network

| logfc | > 0.45 and P < = 1e-5. If you want to view or download the data, you can click [expand]

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Symbolcontrolcontrolcontrolconditionconditionconditioncondition
TACC38.78899.31059.3797.03657.24817.25117.0875
ZWILCH9.27688.66179.44688.76837.36177.77947.4782
CARHSP18.83148.76178.57357.79347.95447.41328.1552
CDCA47.9517.57758.03916.73016.76975.89996.9024
CMC211.310911.288512.72910.619911.18169.65699.6712
JADE16.02095.08185.48674.65064.51144.71624.4006
SUV39H16.97626.82037.51135.11945.78435.37486.3
CRTC35.53525.85086.53625.28365.00914.54424.664
NCAPG8.97868.93818.76616.89627.05956.99578.2826
KIF20A9.18259.62889.7466.47185.49533.77166.6839
NUP10712.034311.646411.984911.457110.637510.294810.7899
ATAD210.78811.078110.99697.90817.82447.298710.4537
SOBP6.78227.06897.14056.38775.91946.00626.0573
RMI18.52697.90767.42587.03195.946.82287.3143
PXMP210.450410.331510.50839.41139.71239.18868.4665
PBK8.66248.28189.61416.65515.87647.17897.9243
TIPIN8.78458.07847.97767.47467.31657.22816.8873
KIF156.92266.52516.85054.43984.5884.28136.6304
DSN17.53657.51917.19356.30855.77175.7697.1099
IGFLR17.32697.19397.6786.38476.24546.61166.8833
TDP17.01127.10558.1336.45816.53536.06046.3972
ASPM8.75298.59118.61146.86385.59396.09548.4603
MCM108.73158.88778.51656.81896.30016.74528.7677
ANP32E8.54057.50877.79186.91385.32656.05476.1675
CDCA89.759610.090410.14798.64948.44247.80789.6012
GINS211.251810.274510.44268.04858.06928.05339.8481
DONSON8.29548.16927.94376.61746.1726.48477.3798
BRIP19.50569.74039.15438.46218.17617.99798.2755
GLRX59.62729.39729.97768.07098.87348.90818.7183
TRMT514.1213.887213.124512.330211.804911.810512.7132
KIF18B8.00768.03367.60295.82075.86885.08377.4421
RACGAP19.94689.509610.30458.70647.64757.44338.0372
CENPN8.27438.4298.28846.96126.95157.03657.3515
SAFB28.70438.46968.65787.787.56747.46677.9744
CELSR210.341610.451710.07049.11789.7078.26819.5325
EIF3F10.119410.036710.43919.80838.85068.60488.745
PTP4A111.712510.319211.103310.01759.39.88458.1789
STMN19.13538.68639.23826.10756.26075.72427.212
PSMD811.879412.192812.652411.136711.519611.452910.4381
FUS9.852110.579310.79149.57579.51349.20048.6818
SRRM110.877411.031211.030110.3539.92648.68210.0444
RAF18.63789.55099.68557.65638.12688.58087.768
TOP2A12.024311.961811.96798.55689.49718.875110.6025
ANP32B11.978411.931211.44810.850711.40279.17869.1506
RRM112.730112.030211.38179.90639.61269.873411.1886
MCM311.199511.330411.226410.427510.14419.004410.3754
ICMT9.16939.26779.3658.48558.71717.85137.8178
BST25.70526.07948.11244.70324.41255.44533.3353
SMC410.3310.265610.40668.95528.81717.92378.0265
MYBL211.88349.824510.40216.96197.63877.913510.4753
TUBG110.58911.402211.16349.15149.69148.515310.6243
CDC25B11.636712.356112.295510.742111.445110.622310.571
BIRC510.308610.66610.78497.74397.69138.20219.3834
IFRD112.229612.759511.766811.353610.861111.54111.1521
NUP629.09839.81869.41048.21418.68898.17916.0816
PLK17.80788.899.3856.27267.46616.73467.734
TACSTD213.515714.188613.039712.761612.078410.771212.5989
UNG10.688611.398310.4659.629210.04459.75259.4001
USP16.84866.7127.03875.44845.41384.79326.1209
FOXM111.910312.204612.19499.66889.26098.69411.3244
TYMS13.689814.259611.806410.065511.47710.354510.6057
LIG18.94629.839510.05166.67847.56727.23736.9483
UBE2S10.44312.501512.49999.202210.221510.43549.1886
HPRT111.313910.791210.966510.229410.080110.11549.2303
CDC2011.754612.660612.50139.439810.039610.015510.2293
UBE2C11.027310.918611.30327.82227.84747.80268.7479
RNASEH2A9.81669.581311.13128.07537.98458.05939.5537
TIMELESS10.881110.450610.68919.43548.98999.17510.328
MDC17.54186.76037.04926.5346.145.39756.1529
SPAG57.52838.20878.59246.24516.82096.50457.3763
EZH28.8759.30028.49058.03027.72317.29097.133
MAD2L19.9310.23419.62958.43987.86338.18649.4892
DDB29.14399.40299.93738.43388.65617.8788.6367
CCNA29.54848.98499.28215.75075.98855.77946.8803
TMPO11.201710.720810.70099.30829.02977.68859.4825
SEC61G11.792711.528412.28811.137810.911710.54519.5161
PTTG19.825110.111610.84448.4468.26866.25618.8662
GGH8.22727.41347.256.39796.01213.96496.8528
RFC28.70759.33069.61427.03166.8887.22457.5429
DLGAP59.32919.60289.83236.79857.63577.21767.9794
VRK18.3327.84448.2437.07867.20246.58667.3091
RFC49.97999.05429.53988.16347.95288.31849.1149
TRIP1310.701410.899911.02628.954110.00379.06859.8769
AURKA7.71497.65748.23886.80176.56557.11295.7529
RFC311.171210.724210.61579.28678.65327.862610.6255
CDKN2C7.42237.39539.21155.17797.21126.56156.2826
RBM148.6189.22359.62798.27328.23538.46417.5576
DBF49.19858.73629.25218.27797.38017.39597.5238
IFI69.2877.93968.82187.86387.78096.70657.6322
BRCA15.85146.06075.37483.89233.40912.92945.8216
CDC25A6.99977.19097.49434.54054.96294.67176.048
NUDT17.48418.08477.80886.85556.14645.85267.3922
FEN111.128811.702210.67649.58558.8989.485911.0472
CHAF1B7.77237.4677.5746.4566.18626.39057.041
PRIM18.8918.50538.77637.60047.09936.44988.0842
TFAP2C12.771113.108212.104510.723411.308411.288112.3879
STIL7.24797.17197.21735.78975.38976.08556.8821
KLK119.02318.43138.5675.13685.11175.25724.6006
SLC25A406.77886.6576.52286.23245.76515.5535.4804
BLM5.87175.32175.83174.61314.02774.67764.6685
GREB112.191911.55411.15310.902510.234810.05769.0454
POLE27.61057.06487.39944.00164.90774.05466.8913
SLBP12.01712.002710.64729.714810.268910.24210.7869
GABPB110.35659.889810.23599.2759.48619.04218.101
KIF146.06595.45626.97544.18384.07393.45563.3216
HMMR9.48669.51629.71657.49988.16717.0579.5088
BAZ1B8.75838.44058.72498.03367.72416.92387.2919
HMGN213.209613.248912.950312.414111.744311.173612.0429
CLU8.07157.25429.68175.46535.20867.08694.482
TUBB10.663411.098711.1598.96489.732210.10348.1572
PSIP18.93488.99589.00447.88917.48644.37257.476
CHI3L110.53938.42537.59936.58324.3247.59626.7999
RPA39.62928.60449.27248.47266.8888.0997.2306
NCBP18.66228.77978.04217.59797.59447.17877.7086
EED9.6988.59488.89588.35167.77087.11297.1859
EYA24.26073.81755.32443.36073.4312.36663.4853
CDKN39.679610.144610.77048.27498.18417.47727.5154
TPX29.00519.993510.40297.73258.15777.38248.891
CTSV7.98987.5537.76245.59566.3655.73236.5152
CHEK27.42767.88057.91356.15117.00375.88616.7929
CACYBP11.690812.216411.65311.148610.856311.077910.7794
POLR2L12.431412.907112.566312.022911.321811.176711.7512
ARL6IP19.35289.753310.23698.78627.98987.09296.5136
TUBA4A10.869711.149110.66429.06149.289610.088610.2614
TMEM9710.752710.670410.89939.793110.00599.0627.7248
NUP1888.19658.50768.57347.60267.65797.63347.5759
CKAP59.25359.3259.54178.32198.32648.11338.3982
FANCI9.54558.71118.84847.25146.58655.66018.7945
DNAJC911.039510.46429.61198.85278.42638.28159.8303
TEX306.81326.51126.61345.5754.65915.35736.1388
MLC15.89585.83355.66074.61534.3044.8354.2499
ELOVL26.03235.42835.9245.14854.87614.39834.224
TUBB4B11.925513.312212.42610.755210.663311.617810.4328
PARP29.3598.9739.45058.29427.88795.93346.586
GGCT12.342413.225312.213111.879810.697610.189210.8668
B2M10.681510.84311.245610.13159.70919.82699.6395
YKT68.66018.42248.72246.3225.95666.13697.2484
SYNCRIP9.745210.094310.65659.07019.53749.04338.42
PRC19.11769.12429.93436.93786.14986.75017.783
TEX28.87869.16858.37988.16397.81357.76447.972
UBR79.77349.866510.19228.12437.7997.54929.0737
ASF1B9.44179.632510.42967.49718.00717.57938.9057

KLF10 transcriptional regulatory sub-network

The possible genes regulated by the transcription factor were obtained by calculation, and the results were displayed in the form of network

ARTICLE: KLF10

[1] KLF10 as a Tumor Suppressor Gene and Its TGF-beta Signaling.

[2] A KDM6A-KLF10 reinforcing feedback mechanism aggravates diabetic podocyte dysfunction.

[3] KLF10 Deficiency in CD4(+) T Cells Triggers Obesity, Insulin Resistance, and Fatty Liver.

[4] KLF10 is a modulatory factor of chondrocyte hypertrophy in developing skeleton.

[5] KLF10 inhibits cell growth by regulating PTTG1 in multiple myeloma under the regulation of microRNA-106b-5p.

[6] KLF10 Gene Expression Modulates Fibrosis in Dystrophic Skeletal Muscle.

[7] KLF10 is upregulated in osteoarthritis and inhibits chondrocyte proliferation and migration by upregulating Acvr1 and suppressing inhbb expression.

[8] KLF10 transcription factor regulates hepatic glucose metabolism in mice.

[9] Deletion of KLF10 Leads to Stress-Induced Liver Fibrosis upon High Sucrose Feeding.

[10] FBW7 targets KLF10 for ubiquitin-dependent degradation.

Transcription factor KEGG

The KEGG pathway of the TF in this TRN is shown below